Cheesy Pesto Zucchini Boats

Featured in: Oven-Based Meals

Tender zucchini halves are hollowed and filled with a vibrant blend of basil pesto, cherry tomatoes, red onion, garlic, and rich cheeses including Parmesan, mozzarella, and ricotta. Optional quinoa adds heartiness while pine nuts add texture. Baked until golden and bubbly, these colorful boats offer a satisfying vegetarian main or side dish. Olive oil and fresh basil enhance the Mediterranean-inspired flavors in an easy 45-minute preparation. A perfect gluten-free option with a creamy, cheesy finish and balanced vegetable freshness.

Updated on Tue, 23 Dec 2025 14:02:00 GMT
Golden, bubbly melted cheese topping fresh Cheesy Pesto Zucchini Boats filled with savory vegetables. Save
Golden, bubbly melted cheese topping fresh Cheesy Pesto Zucchini Boats filled with savory vegetables. | cozymsemen.com

One summer afternoon, I was rummaging through the crisper drawer and found four fat zucchini that seemed to mock me with their size. Instead of the usual spiralizing routine, I grabbed a spoon and hollowed them out like little edible canoes, then filled them with everything green and cheesy I could find. That first bite—the tender zucchini giving way to basil pesto and melted mozzarella—felt like I'd accidentally invented something special. It became my go-to way to use up garden zucchini without feeling like I was eating the same thing for the hundredth time.

I made these boats for a dinner party once when I was trying to impress my neighbor who always seemed to eat the fanciest things. She took one bite and actually asked for the recipe, which honestly meant more to me than any complicated dish ever could. Now I make them whenever I want to feel confident in the kitchen without spending all day cooking.

Ingredients

  • 4 medium zucchini: Pick ones that feel firm and aren't too waterlogged—they'll hold their shape better in the oven and won't turn into mush while baking.
  • 1 cup cherry tomatoes, halved: These burst slightly as they cook, releasing their sweet juice into the filling and preventing it from feeling dry.
  • 1/2 small red onion, finely chopped: The small amount keeps things from tasting too sharp, and the finely chopped pieces distribute flavor evenly throughout.
  • 1 clove garlic, minced: One clove is actually perfect here—garlic is a supporting player, not the main event.
  • 1/3 cup basil pesto: Store-bought works beautifully if you're short on time, but homemade changes the whole character of the dish if you have the fifteen minutes.
  • 1/2 cup cooked quinoa or rice, optional: This makes the filling more substantial and filling, turning dinner into one complete plate rather than something that needs sides.
  • 1/4 cup grated Parmesan cheese: Mix some into the filling and save some for the top—this builds layers of cheesy flavor.
  • 1/2 cup shredded mozzarella cheese: This is what actually melts and gets all bubbly and golden on top, so don't skip it.
  • 1/2 cup ricotta or cottage cheese: This keeps the filling creamy and prevents it from drying out as the zucchini releases moisture.
  • 2 tbsp pine nuts or chopped walnuts, optional: They add a little crunch and a subtle richness that surprises people in the best way.
  • Salt and pepper, to taste: Season as you go rather than all at once—it's the only way to avoid over-salting.
  • Olive oil, for drizzling: Good olive oil matters here since you're not cooking it down into something complicated.

Instructions

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Heat your oven and prepare the vessel:
Set the oven to 400°F and line a baking dish with parchment paper or give it a light greasing. This is the moment when you're setting yourself up for success—a prepared space means everything else flows smoothly.
Hollow out your zucchini boats:
Slice each zucchini lengthwise and use a spoon to gently scoop out the center, being careful to leave about a quarter-inch of shell so the boat doesn't collapse. Chop the scooped flesh finely and set it aside—this is actually the best part of the zucchini once it's cooked down.
Set the stage in the baking dish:
Arrange your zucchini halves cut side up, brush them lightly with olive oil, and season with a pinch of salt and pepper. This small step prevents them from sticking and makes sure every bite has some richness.
Build the filling:
In a bowl, combine the chopped zucchini flesh, halved cherry tomatoes, red onion, garlic, pesto, cooked quinoa or rice if you're using it, ricotta, and half the Parmesan. Mix until everything is evenly distributed, then taste and season with salt and pepper until it tastes bright and balanced.
Fill and crown your boats:
Spoon the filling generously into each zucchini boat, then top with shredded mozzarella and a final sprinkle of Parmesan. If you have pine nuts or walnuts, scatter them over the top now for a little textural surprise.
Let the oven work its magic:
Bake for 20 to 25 minutes until the zucchini is fork-tender and the cheese on top is bubbly and golden at the edges. You'll know it's done when the kitchen smells unbelievably good and you can't wait another second.
Rest and finish:
Let the boats cool for just a few minutes before serving—this gives everything a moment to set. Tear some fresh basil over the top if you have it, though they're absolutely perfect without it.
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There's something about serving these boats that makes even a simple weeknight dinner feel special. The moment someone cuts into one and the cheese stretches, you know you've made something that actually tastes as good as it looks.

Making Pesto Count

The pesto is the soul of this dish, so it deserves a moment of attention. If you're making it from scratch, pulse fresh basil with garlic, pine nuts, Parmesan, and good olive oil until it's just shy of completely smooth—you want a little texture. If you're using store-bought, that's genuinely fine, but taste it first to see if it needs a squeeze of lemon juice or a pinch more salt to wake it up.

Vegetables as Opportunity

While the recipe is delicious as written, the filling is actually a canvas. Bell peppers add sweetness, spinach brings earthiness, sliced olives bring their salty punch, and sun-dried tomatoes add concentrated tomato flavor. I've even thrown in diced mushrooms when I had them on hand. The key is not to overcrowd the boat—you want the filling to fit neatly without spilling over.

Serving and Pairing Ideas

These boats feel substantial enough to serve as a main course with nothing more than a crisp green salad and some crusty bread for soaking up the cheese. If you're building a larger meal, they work beautifully alongside roasted tomatoes or a simple grain salad. For wine, a chilled Sauvignon Blanc is perfect, or if you prefer red, a light Italian wine won't overpower the delicate basil flavor.

  • Make them ahead and reheat gently in a 350°F oven for about ten minutes—they're actually even better the next day as flavors meld.
  • If you want to make these vegan, plant-based mozzarella and a cashew-based ricotta work surprisingly well and don't sacrifice much texture.
  • Leftovers can even be chopped up and tossed into pasta or grain bowls for a completely different meal.
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These baked Cheesy Pesto Zucchini Boats showcase vibrant pesto filling and a hearty vegetarian meal. Save
These baked Cheesy Pesto Zucchini Boats showcase vibrant pesto filling and a hearty vegetarian meal. | cozymsemen.com

There's real joy in putting a beautiful plate of these in front of someone and watching their face light up at the first bite. They're one of those dishes that somehow feels both effortless and impressive.

Recipe FAQs

What is the best way to prepare zucchini for stuffing?

Slice the zucchini lengthwise and scoop out the center carefully to create a hollow shell, leaving about a 1/4-inch thick wall for structure.

Can I use store-bought pesto for the filling?

Yes, store-bought basil pesto works well, but homemade pesto can offer fresher flavor and customization.

How do I achieve a golden, bubbly cheese topping?

Sprinkle shredded mozzarella and Parmesan over the filling and bake at 400°F until the cheese melts and turns golden, about 20-25 minutes.

Are there good alternatives for cheese to suit vegan diets?

Plant-based cheeses and cashew or tofu ricotta substitutes can be used to create a vegan-friendly version with similar textures.

What can I add for extra flavor and texture?

Chopped spinach, bell peppers, olives, or nuts like pine nuts or walnuts can enhance both flavor and crunch in the filling.

Is this dish suitable for gluten-free diets?

Yes, using gluten-free pesto and quinoa or rice ensures the dish remains gluten-free.

Cheesy Pesto Zucchini Boats

Zucchini boats stuffed with basil pesto, vegetables, and melted cheese for a tasty vegetarian meal.

Prep Time
20 min
Time to Cook
25 min
Total Duration
45 min
By Cozy Msemen Daniel Crawford


Skill Level Easy

Cuisine Mediterranean

Output 4 Portions

Diet Info Meat-Free, No Gluten

What You Need

Vegetables

01 4 medium zucchini
02 1 cup cherry tomatoes, halved
03 1/2 small red onion, finely chopped
04 1 clove garlic, minced

Pesto & Filling

01 1/3 cup basil pesto
02 1/2 cup cooked quinoa or rice (optional)
03 1/4 cup grated Parmesan cheese
04 1/2 cup shredded mozzarella cheese
05 1/2 cup ricotta or cottage cheese
06 2 tablespoons pine nuts or chopped walnuts (optional)
07 Salt and pepper, to taste
08 Olive oil, for drizzling

How-To Steps

Step 01

Preheat oven: Preheat oven to 400°F. Line a baking dish with parchment paper or lightly grease it.

Step 02

Prepare zucchini boats: Slice zucchini lengthwise and scoop out the centers, leaving a 1/4-inch thick shell. Chop the reserved flesh finely.

Step 03

Arrange and season zucchini: Place zucchini halves cut side up in the baking dish. Brush with olive oil and season with salt and pepper.

Step 04

Mix filling: Combine chopped zucchini flesh, cherry tomatoes, red onion, garlic, basil pesto, cooked quinoa or rice if using, ricotta or cottage cheese, and half the Parmesan cheese in a bowl. Season with salt and pepper and mix thoroughly.

Step 05

Fill zucchini boats: Spoon the filling evenly into zucchini shells. Top with shredded mozzarella and sprinkle remaining Parmesan. Add pine nuts or walnuts if desired.

Step 06

Bake: Bake for 20 to 25 minutes until zucchini is tender and cheese is melted and lightly browned.

Step 07

Serve: Allow to cool briefly before serving. Optionally garnish with fresh basil.

Tools Needed

  • Chef's knife
  • Spoon
  • Mixing bowl
  • Baking dish
  • Oven

Allergy Details

Please check every ingredient for allergens and reach out to your healthcare provider with concerns.
  • Contains dairy and tree nuts if pine nuts or walnuts are included.

Nutrition Info (per serving)

Nutritional info is an estimate. Cozy Msemen recommends asking a professional about your needs.
  • Calories: 255
  • Fats: 15 g
  • Carbohydrates: 16 g
  • Proteins: 13 g